Czarnocka-Cieciura A, et al. (2024) Modeling of mRNA deadenylation rates reveal a complex relationship between mRNA deadenylation and decay. EMBO J 43(24):6525-6554 PMID:39394354
Schmid M, et al. (2019) Preparation of RNA 3' End Sequencing Libraries of Total and 4-thiouracil Labeled RNA for Simultaneous Measurement of Transcription, RNA Synthesis and Decay in S. cerevisiae. Bio Protoc 9(6) PMID:30931349
Schmid M, et al. (2018) Simultaneous Measurement of Transcriptional and Post-transcriptional Parameters by 3' End RNA-Seq. Cell Rep 24(9):2468-2478.e4 PMID:30157438
Tudek A, et al. (2018) The multitasking polyA tail: nuclear RNA maturation, degradation and export. Philos Trans R Soc Lond B Biol Sci 373(1762) PMID:30397105
Düring L, et al. (2012) MRN1 implicates chromatin remodeling complexes and architectural factors in mRNA maturation. PLoS One 7(9):e44373 PMID:23028530
Feddersen A, et al. (2012) Saccharomyces cerevisiae Ngl3p is an active 3'-5' exonuclease with a specificity towards poly-A RNA reminiscent of cellular deadenylases. Nucleic Acids Res 40(2):837-46 PMID:21965533
Assenholt J, et al. (2011) Implication of Ccr4-Not complex function in mRNA quality control in Saccharomyces cerevisiae. RNA 17(10):1788-94 PMID:21862638
Jimeno-González S, et al. (2010) The yeast 5'-3' exonuclease Rat1p functions during transcription elongation by RNA polymerase II. Mol Cell 37(4):580-7 PMID:20188675
Tomecki R, et al. (2010) The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L. EMBO J 29(14):2342-57 PMID:20531386
Preker P, et al. (2009) RNA polymerase plays both sides: vivid and bidirectional transcription around and upstream of active promoters. Cell Cycle 8(8):1106-7 PMID:19305135
Qu X, et al. (2009) Assembly of an export-competent mRNP is needed for efficient release of the 3'-end processing complex after polyadenylation. Mol Cell Biol 29(19):5327-38 PMID:19635808
Jensen MM, et al. (2008) Requirements for chromatin reassembly during transcriptional downregulation of a heat shock gene in Saccharomyces cerevisiae. FEBS J 275(11):2956-64 PMID:18445041
Thomsen R, et al. (2008) General, rapid, and transcription-dependent fragmentation of nucleolar antigens in S. cerevisiae mRNA export mutants. RNA 14(4):706-16 PMID:18258809
Lykke-Andersen S and Jensen TH (2007) Overlapping pathways dictate termination of RNA polymerase II transcription. Biochimie 89(10):1177-82 PMID:17629387
Midtgaard SF, et al. (2006) Structure of the nuclear exosome component Rrp6p reveals an interplay between the active site and the HRDC domain. Proc Natl Acad Sci U S A 103(32):11898-903 PMID:16882719
Zhelkovsky A, et al. (2006) The role of the Brr5/Ysh1 C-terminal domain and its homolog Syc1 in mRNA 3'-end processing in Saccharomyces cerevisiae. RNA 12(3):435-45 PMID:16431986
Jensen TH, et al. (2001) A block to mRNA nuclear export in S. cerevisiae leads to hyperadenylation of transcripts that accumulate at the site of transcription. Mol Cell 7(4):887-98 PMID:11336711