Objective: To obtain the crystal of 5',5'''-P1,P4-tetraphosphate phosphorylase I (Apal) of Saccharomyces cerevisiae for X-ray crystal structure and function analysis.
Methods: We amplified the coding region of an N-terminally truncated version of Saccharomyces cerevisiae diadenosion 5',5'''-P1,P4-tetraphosphate phosphorylase I (Apaldnl6) , and cloned it into the pET28 derived expression vector. After having screened the recombinant plasmids by PCR and confirmed them by DNA sequencing, we transformed a positive recombinant plasmid into the Escherichia coli BL21(DE3) cells for efficient expression. Then the expression and solubility of the recombinant Apaldnl6 protein were analyzed by SDS-PAGE after proper concentration of IPTG induction. Following that, we collected the soluble Apaldnl6 protein and purified it to homogeneity by sequential Ni-NTA affinity chromatography and Superdex 75 gel filtration, and then detected the purity and molecular weight of the desired protein by SDS-PAGE and mass spectrometry . In addition, we screened the crystallization conditions of Apaldnl6 with Hampton Research kits using the hanging drop vapor diffusion method.
Results: We efficiently expressed an N-terminally truncated Saccharomyces cerevisiae diadenosion 5',5'''-P1, P4-tetraphosphate phosphorylase I in Escherichia coli BL21(DE3). The recombinant protein was partially soluble and was purified to homogeneity with a single band of approximately 36 kDa after SDS-PAGE. Mass spectrometry analysis further confirmed the purity and intactness of the recombinant protein.Moreover, we obtained the needle crystals of Apaldnl6 by hanging drop vapor diffusion method.
Conclusion: Escherichia coli BL21(DE3) is an efficient expression system for producing enough quantity of Apaldnl6 protein. The purified recombinant Apaldnl6 protein is suitable for crystallization and further structural investigation.
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Evidence ID | Analyze ID | Gene/Complex | Systematic Name/Complex Accession | Qualifier | Gene Ontology Term ID | Gene Ontology Term | Aspect | Annotation Extension | Evidence | Method | Source | Assigned On | Reference |
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Evidence ID | Analyze ID | Gene | Gene Systematic Name | Phenotype | Experiment Type | Experiment Type Category | Mutant Information | Strain Background | Chemical | Details | Reference |
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Evidence ID | Analyze ID | Gene | Gene Systematic Name | Disease Ontology Term | Disease Ontology Term ID | Qualifier | Evidence | Method | Source | Assigned On | Reference |
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Site | Modification | Modifier | Source | Reference |
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Evidence ID | Analyze ID | Interactor | Interactor Systematic Name | Interactor | Interactor Systematic Name | Allele | Assay | Annotation | Action | Phenotype | SGA score | P-value | Source | Reference | Note |
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Complement ID | Locus ID | Gene | Species | Gene ID | Strain background | Direction | Details | Source | Reference |
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Evidence ID | Analyze ID | Dataset | Description | Keywords | Number of Conditions | Reference |
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